@@ -1,19 +1,171 @@
-api std:doc -1 api.html API
-api std:label -1 api.html#$ API
-configuration std:doc -1 configuration.html Configuration file
-configuration std:label -1 configuration.html#$ Configuration file
+# Sphinx inventory version 2
+# Project: pytools
+# Version: 2021.2.8
+# The remainder of this file is compressed using zlib.
+
+pytools py:module 0 reference.html#module-$ -
+pytools.DebugProcessLogger py:class 1 reference.html#$ -
+pytools.F py:class 1 reference.html#$ -
+pytools.ProcessLogger py:class 1 reference.html#$ -
+pytools.ProcessLogger.__enter__ py:method 1 reference.html#$ -
+pytools.ProcessLogger.__exit__ py:method 1 reference.html#$ -
+pytools.ProcessLogger.__init__ py:method 1 reference.html#$ -
+pytools.ProcessLogger.done py:method 1 reference.html#$ -
+pytools.ProcessTimer py:class 1 reference.html#$ -
+pytools.ProcessTimer.__enter__ py:method 1 reference.html#$ -
+pytools.ProcessTimer.__exit__ py:method 1 reference.html#$ -
+pytools.ProcessTimer.done py:method 1 reference.html#$ -
+pytools.ProcessTimer.process_elapsed py:attribute 1 reference.html#$ -
+pytools.ProcessTimer.wall_elapsed py:attribute 1 reference.html#$ -
+pytools.ProgressBar py:class 1 reference.html#$ -
+pytools.ProgressBar.__enter__ py:method 1 reference.html#$ -
+pytools.ProgressBar.__exit__ py:method 1 reference.html#$ -
+pytools.ProgressBar.draw py:method 1 reference.html#$ -
+pytools.ProgressBar.finished py:method 1 reference.html#$ -
+pytools.ProgressBar.progress py:method 1 reference.html#$ -
+pytools.ProgressBar.set_progress py:method 1 reference.html#$ -
+pytools.T py:class 1 reference.html#$ -
+pytools.Table py:class 1 reference.html#$ -
+pytools.Table.__str__ py:method 1 reference.html#$ -
+pytools.Table.add_row py:method 1 reference.html#$ -
+pytools.Table.github_markdown py:method 1 reference.html#$ -
+pytools.Table.latex py:method 1 reference.html#$ -
+pytools.UniqueNameGenerator py:class 1 reference.html#$ -
+pytools.UniqueNameGenerator.__call__ py:method 1 reference.html#$ -
+pytools.UniqueNameGenerator.add_name py:method 1 reference.html#$ -
+pytools.UniqueNameGenerator.add_names py:method 1 reference.html#$ -
+pytools.UniqueNameGenerator.is_name_conflicting py:method 1 reference.html#$ -
+pytools.all_roughly_equal py:function 1 reference.html#$ -
+pytools.argmax py:function 1 reference.html#$ -
+pytools.argmax2 py:function 1 reference.html#$ -
+pytools.argmin py:function 1 reference.html#$ -
+pytools.argmin2 py:function 1 reference.html#$ -
+pytools.cartesian_product py:function 1 reference.html#$ -
+pytools.codegen py:module 0 codegen.html#module-$ -
+pytools.codegen.CodeGenerator py:class 1 codegen.html#$ -
+pytools.codegen.CodeGenerator.__call__ py:method 1 codegen.html#$ -
+pytools.codegen.CodeGenerator.add_to_preamble py:method 1 codegen.html#$ -
+pytools.codegen.CodeGenerator.dedent py:method 1 codegen.html#$ -
+pytools.codegen.CodeGenerator.extend py:method 1 codegen.html#$ -
+pytools.codegen.CodeGenerator.get py:method 1 codegen.html#$ -
+pytools.codegen.CodeGenerator.indent py:method 1 codegen.html#$ -
+pytools.codegen.Indentation py:class 1 codegen.html#$ -
+pytools.codegen.Indentation.__enter__ py:method 1 codegen.html#$ -
+pytools.codegen.Indentation.__exit__ py:method 1 codegen.html#$ -
+pytools.codegen.Indentation.generator py:attribute 1 codegen.html#$ -
+pytools.codegen.remove_common_indentation py:function 1 codegen.html#$ -
+pytools.comb py:function 1 reference.html#$ -
+pytools.datatable py:module 0 reference.html#module-$ -
+pytools.datatable.DataTable py:class 1 reference.html#$ -
+pytools.datatable.DataTable.__init__ py:method 1 reference.html#$ -
+pytools.datatable.DataTable.copy py:method 1 reference.html#$ -
+pytools.datatable.DataTable.deep_copy py:method 1 reference.html#$ -
+pytools.datatable.DataTable.join py:method 1 reference.html#$ -
+pytools.deprecate_keyword py:function 1 reference.html#$ -
+pytools.distinct_pairs py:function 1 reference.html#$ -
+pytools.download_from_web_if_not_present py:function 1 reference.html#$ -
+pytools.generate_all_integer_tuples_below py:function 1 reference.html#$ -
+pytools.generate_nonnegative_integer_tuples_below py:function 1 reference.html#$ -
+pytools.generate_nonnegative_integer_tuples_summing_to_at_most py:function 1 reference.html#$ -
+pytools.generate_numbered_unique_names py:function 1 reference.html#$ -
+pytools.generate_permutations py:function 1 reference.html#$ -
+pytools.generate_unique_names py:function 1 reference.html#$ -
+pytools.generate_unique_permutations py:function 1 reference.html#$ -
+pytools.graph py:module 0 graph.html#module-$ -
+pytools.graph.CycleError py:class 1 graph.html#$ -
+pytools.graph.T py:class 1 graph.html#$ -
+pytools.graph.a_star py:function 1 graph.html#$ -
+pytools.graph.compute_induced_subgraph py:function 1 graph.html#$ -
+pytools.graph.compute_sccs py:function 1 graph.html#$ -
+pytools.graph.compute_topological_order py:function 1 graph.html#$ -
+pytools.graph.compute_transitive_closure py:function 1 graph.html#$ -
+pytools.graph.contains_cycle py:function 1 graph.html#$ -
+pytools.invoke_editor py:function 1 reference.html#$ -
+pytools.is_single_valued py:function 1 reference.html#$ -
+pytools.keyed_memoize_in py:function 1 reference.html#$ -
+pytools.keyed_memoize_method py:function 1 reference.html#$ -
+pytools.keyed_memoize_on_first_arg py:function 1 reference.html#$ -
+pytools.levi_civita py:function 1 reference.html#$ -
+pytools.log_process py:class 1 reference.html#$ -
+pytools.memoize py:function 1 reference.html#$ -
+pytools.memoize_in py:function 1 reference.html#$ -
+pytools.memoize_method py:function 1 reference.html#$ -
+pytools.memoize_on_first_arg py:function 1 reference.html#$ -
+pytools.natorder py:function 1 reference.html#$ -
+pytools.natsorted py:function 1 reference.html#$ -
+pytools.obj_array py:module 0 obj_array.html#module-$ -
+pytools.obj_array.flat_obj_array py:function 1 obj_array.html#$ -
+pytools.obj_array.make_obj_array py:function 1 obj_array.html#$ -
+pytools.obj_array.obj_array_imag py:function 1 obj_array.html#$ -
+pytools.obj_array.obj_array_imag_copy py:function 1 obj_array.html#$ -
+pytools.obj_array.obj_array_real py:function 1 obj_array.html#$ -
+pytools.obj_array.obj_array_real_copy py:function 1 obj_array.html#$ -
+pytools.obj_array.obj_array_vectorize py:function 1 obj_array.html#$ -
+pytools.obj_array.obj_array_vectorize_n_args py:function 1 obj_array.html#$ -
+pytools.one py:function 1 reference.html#$ -
+pytools.perm py:function 1 reference.html#$ -
+pytools.persistent_dict py:module 0 persistent_dict.html#module-$ -
+pytools.persistent_dict.CollisionWarning py:exception 1 persistent_dict.html#$ -
+pytools.persistent_dict.KeyBuilder py:class 1 persistent_dict.html#$ -
+pytools.persistent_dict.KeyBuilder.__call__ py:method 1 persistent_dict.html#$ -
+pytools.persistent_dict.KeyBuilder.new_hash py:method 1 persistent_dict.html#$ -
+pytools.persistent_dict.KeyBuilder.rec py:method 1 persistent_dict.html#$ -
+pytools.persistent_dict.NoSuchEntryError py:exception 1 persistent_dict.html#$ -
+pytools.persistent_dict.PersistentDict py:class 1 persistent_dict.html#$ -
+pytools.persistent_dict.PersistentDict.__delitem__ py:method 1 persistent_dict.html#$ -
+pytools.persistent_dict.PersistentDict.__getitem__ py:method 1 persistent_dict.html#$ -
+pytools.persistent_dict.PersistentDict.__init__ py:method 1 persistent_dict.html#$ -
+pytools.persistent_dict.PersistentDict.__setitem__ py:method 1 persistent_dict.html#$ -
+pytools.persistent_dict.PersistentDict.clear py:method 1 persistent_dict.html#$ -
+pytools.persistent_dict.PersistentDict.fetch py:method 1 persistent_dict.html#$ -
+pytools.persistent_dict.PersistentDict.remove py:method 1 persistent_dict.html#$ -
+pytools.persistent_dict.PersistentDict.store py:method 1 persistent_dict.html#$ -
+pytools.persistent_dict.PersistentDict.store_if_not_present py:method 1 persistent_dict.html#$ -
+pytools.persistent_dict.ReadOnlyEntryError py:exception 1 persistent_dict.html#$ -
+pytools.persistent_dict.WriteOncePersistentDict py:class 1 persistent_dict.html#$ -
+pytools.persistent_dict.WriteOncePersistentDict.__getitem__ py:method 1 persistent_dict.html#$ -
+pytools.persistent_dict.WriteOncePersistentDict.__init__ py:method 1 persistent_dict.html#$ -
+pytools.persistent_dict.WriteOncePersistentDict.__setitem__ py:method 1 persistent_dict.html#$ -
+pytools.persistent_dict.WriteOncePersistentDict.clear py:method 1 persistent_dict.html#$ -
+pytools.persistent_dict.WriteOncePersistentDict.fetch py:method 1 persistent_dict.html#$ -
+pytools.persistent_dict.WriteOncePersistentDict.store py:method 1 persistent_dict.html#$ -
+pytools.persistent_dict.WriteOncePersistentDict.store_if_not_present py:method 1 persistent_dict.html#$ -
+pytools.reshaped_view py:function 1 reference.html#$ -
+pytools.resolve_name py:function 1 reference.html#$ -
+pytools.single_valued py:function 1 reference.html#$ -
+pytools.string_histogram py:function 1 reference.html#$ -
+pytools.tag py:module 0 tag.html#module-$ -
+pytools.tag.DottedName py:class 1 tag.html#$ -
+pytools.tag.DottedName.from_class py:method 1 tag.html#$ -
+pytools.tag.DottedName.name_parts py:attribute 1 tag.html#$ -
+pytools.tag.NonUniqueTagError py:class 1 tag.html#$ -
+pytools.tag.T_co py:class 1 tag.html#$ -
+pytools.tag.Tag py:class 1 tag.html#$ -
+pytools.tag.Tag.__repr__ py:method 1 tag.html#$ -
+pytools.tag.Tag.tag_name py:attribute 1 tag.html#$ -
+pytools.tag.Taggable py:class 1 tag.html#$ -
+pytools.tag.Taggable.__init__ py:method 1 tag.html#$ -
+pytools.tag.Taggable.copy py:method 1 tag.html#$ -
+pytools.tag.Taggable.tagged py:method 1 tag.html#$ -
+pytools.tag.Taggable.tags py:attribute 1 tag.html#$ -
+pytools.tag.Taggable.tags_of_type py:method 1 tag.html#$ -
+pytools.tag.Taggable.without_tags py:method 1 tag.html#$ -
+pytools.tag.UniqueTag py:class 1 tag.html#$ -
+pytools.tag.check_tag_uniqueness py:function 1 tag.html#$ -
+pytools.typedump py:function 1 reference.html#$ -
+pytools.unordered_hash py:function 1 reference.html#$ -
+pytools.wandering_element py:function 1 reference.html#$ -
+pytools.word_wrap py:function 1 reference.html#$ -
+codegen std:doc -1 codegen.html Tools for Source Code Generation
 genindex std:label -1 genindex.html Index
-index std:doc -1 index.html Welcome to xPore’s documentation!
-installation std:doc -1 installation.html Installation
-installation std:label -1 installation.html#$ Installation
+graph std:doc -1 graph.html Graph Algorithms
+index std:doc -1 index.html Welcome to pytools’s documentation!
+license std:label -1 misc.html#$ License
+misc std:doc -1 misc.html Installation
 modindex std:label -1 py-modindex.html Module Index
-outputtable std:doc -1 outputtable.html Output table description
-outputtable std:label -1 outputtable.html#$ Output table description
-preparation std:doc -1 preparation.html Data preparation from raw reads
-preparation std:label -1 preparation.html#$ Data preparation from raw reads
+obj_array std:doc -1 obj_array.html Handling numpy Object Arrays
+persistent_dict std:doc -1 persistent_dict.html Persistent Hashing and Persistent Dictionaries
 py-modindex std:label -1 py-modindex.html Python Module Index
-quickstart std:doc -1 quickstart.html Quickstart - Detection of differential RNA modifications
-quickstart std:label -1 quickstart.html#$ Quickstart - Detection of differential RNA modifications
-scripts std:doc -1 scripts.html Scripts
-scripts std:label -1 scripts.html#$ Scripts
+reference std:doc -1 reference.html A Collection of Utilities
 search std:label -1 search.html Search Page
+tag std:doc -1 tag.html Tag Interface
